biopal.fd.main_FD.ForestDisturbance

class biopal.fd.main_FD.ForestDisturbance(configuration_file)

FD main APP ForestDisturbance

run this APP to execute the complete Forest Disturbance processing chain.

ForestDisturbance is composed by two sub APPS automatically called in sequence when standard launch is performed: InitializeAlgorithmFD -> CoreProcessingFD

Refer to dataset_query, InitializeAlgorithmFD and CoreProcessingFD documentation for step by step run.

See also

biopal.dataset_query.dataset_query.dataset_query

it’s the APP to be called before this APP

InitializeAlgorithmFD

it’s the first of the two sub-APPs called by ForestDisturbance preocessor

CoreProcessingFD

it’s the second of the two sub-APPs called by ForestDisturbance processor

Examples

Manual FD chain execution

>>> from biopal.dataset_query.dataset_query import dataset_query
>>> from biopal.fd.main_FD import ForestDisturbance
>>> dq_obj = dataset_query()
>>> input_file_up = dq_obj.run( input_file )
>>> chain_obj = ForestDisturbance( configuration_file )
>>> chain_obj.run( input_file_up )

• input_file: path of the BioPAL input file

• input_file_up: same of input_file with also the “stack_based_processing” section

• configuration_file: path of the BioPAL configuration file

Attributes:

configuration_filestr

path of the Configuration_File.xml file

Methods

run( input_file_path )	run the ForestDisturbance processing
name	(str) name of the APP

__init__(configuration_file)

Methods

__init__(configuration_file)
name()
run(input_file_xml)