biopal.fd.main_FD.CoreProcessingFD

class biopal.fd.main_FD.CoreProcessingFD(configuration_file)

CoreProcessingFD APP

CoreProcessingFD is the second of the two sub-APPs called by ForestDisturbance processor.

It calls the “change detection” algorithm (which is implemented as a function) once for each nominal geometry: this app will cycle over each nominal geometry and for each of them it calls the change detection function that will cycle over all the global cycles, computing the change detection for the current geometry. It is automatically called in the default run (see Getting Started section), or can be manually launched (stand alone) following this sequence: dataset_query -> InitializeAlgorithmFD -> CoreProcessingFD

See also

biopal.dataset_query.dataset_query.dataset_query

it’s the first APP to be called in the manual sequence

InitializeAlgorithmFD

it’s the APP which prepares the input for this APP

Notes

It is possible to launch many istances of “CoreProcessingFD” APP without need to re launch all the processor.

Examples

Manual FD chain execution

>>> from biopal.dataset_query.dataset_query import dataset_query
>>> from biopal.fd.main_FD import InitializeAlgorithmFD, CoreProcessingFD
>>> dq_obj = dataset_query()
>>> input_file_up = dq_obj.run( input_file )
>>> init_fd_obj = InitializeAlgorithmFD( config_file )
>>> input_file_up2 = init_fd_obj.run( input_file_up )
>>> fdp_obj = CoreProcessingFD( config_file )
>>> fdp_obj.run( input_file_up2 )

• input_file: path of the BioPAL input file

• input_file_up1: same of input_file with also the “stack_based_processing” section

• input_file_up2: same of input_file_up1 with also the “core_processing_fd” section

• config_file: path of the BioPAL configuration file

Attributes:

configuration_filestr

path of the Configuration_File.xml file

Methods

run( input_file_path )	run the InitializeAlgorithmFD process
name	(str) name of the APP

__init__(configuration_file)

Methods

__init__(configuration_file)
name()
run(input_file_xml)